{"id":920,"date":"2018-06-19T02:55:19","date_gmt":"2018-06-19T02:55:19","guid":{"rendered":"http:\/\/163.180.4.222\/lab\/?p=920"},"modified":"2019-10-15T18:20:49","modified_gmt":"2019-10-15T09:20:49","slug":"de-novo-dna-synthesis-using-polymerase-nucleotide-conjugates","status":"publish","type":"post","link":"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=920","title":{"rendered":"De novo DNA synthesis using polymerase-nucleotide conjugates"},"content":{"rendered":"<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>(<a href=\"https:\/\/www.nature.com\/articles\/nbt.4173?utm_source=feedburner&amp;utm_medium=feed&amp;utm_campaign=Feed%3A+nbt%2Frss%2Fcurrent+%28Nature+Biotechnology+-+Issue%29\">\uc6d0\ubb38<\/a>)<\/p>\n<p>&nbsp;<\/p>\n<p class=\"text13 text-gray-light tiny-space-below\" data-test=\"article-identifier\"><a href=\"https:\/\/www.nature.com\/articles\/nbt.4173?utm_source=feedburner&amp;utm_medium=feed&amp;utm_campaign=Feed%3A+nbt%2Frss%2Fcurrent+%28Nature+Biotechnology+-+Issue%29#article-info\">Published:\u00a0<time datetime=\"2018-06-18\">18 June 2018<\/time><\/a><\/p>\n<div class=\"grid-12 cleared\" data-container-section=\"info\">\n<p class=\"text14 standard-space-below\"><i>Nature Biotechnology<\/i><\/p>\n<\/div>\n<div class=\"grid-12 cleared\" data-container-section=\"info\">\n<p class=\"text14 standard-space-below\">\n<\/div>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<h2 id=\"abstract\" class=\"js-section-title section-title position-relative strong tighten-line-height background-gray-light pt20 pb6 pl0 pr20 standard-space-below mq640-pt20 mq640-pb10 mq640-pl20 mq640-mt0 extend-left\">Abstract<\/h2>\n<div id=\"abstract-content\" class=\"pl20 mq875-pl0 js-collapsible-section\">\n<p>&nbsp;<\/p>\n<p>Oligonucleotides are almost exclusively synthesized using the nucleoside phosphoramidite method, even though it is limited to the direct synthesis of\u00a0<span class=\"stix\">\u223c<\/span>200 mers and produces hazardous waste. Here, we describe an oligonucleotide synthesis strategy that uses the template-independent polymerase terminal deoxynucleotidyl transferase (TdT). Each TdT molecule is conjugated to a single deoxyribonucleoside triphosphate (dNTP) molecule that it can incorporate into a primer. After incorporation of the tethered dNTP, the 3\u2032 end of the primer remains covalently bound to TdT and is inaccessible to other TdT\u2013dNTP molecules. Cleaving the linkage between TdT and the incorporated nucleotide releases the primer and allows subsequent extension. We demonstrate that TdT\u2013dNTP conjugates can quantitatively extend a primer by a single nucleotide in 10\u201320 s, and that the scheme can be iterated to write a defined sequence. This approach may form the basis of an enzymatic oligonucleotide synthesizer.<\/p>\n<\/div>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>&nbsp; &nbsp; (\uc6d0\ubb38) &nbsp; Published:\u00a018 June 2018 Nature Biotechnology &nbsp; &nbsp; &nbsp; Abstract &nbsp; Oligonucleotides are almost exclusively synthesized using the nucleoside phosphoramidite method, even<a href=\"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=920\" class=\"more-link\">(more&#8230;)<\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_monsterinsights_skip_tracking":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_feature_clip_id":0,"_jetpack_memberships_contains_paid_content":false,"footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2},"jetpack_post_was_ever_published":false},"categories":[33,34,29,30],"tags":[7,8,3,4],"class_list":["post-920","post","type-post","status-publish","format-standard","hentry","category-do-biology","category-lets-do-chemistry","category-lets-do-science","category-recent-science-news","tag-do-biology","tag-lets-do-chemistry","tag-lets-do-science","tag-recent-science-news"],"aioseo_notices":[],"aioseo_head":"\n\t\t<!-- All in One SEO 4.9.10 - aioseo.com -->\n\t<meta name=\"description\" content=\"(\uc6d0\ubb38) Published: 18 June 2018 Nature Biotechnology Abstract Oligonucleotides are almost exclusively synthesized using the nucleoside phosphoramidite method, even though it is limited to the direct synthesis of \u223c200 mers and produces hazardous waste. Here, we describe an oligonucleotide synthesis strategy that uses the template-independent polymerase terminal deoxynucleotidyl transferase (TdT).\" \/>\n\t<meta name=\"robots\" content=\"max-image-preview:large\" \/>\n\t<meta name=\"author\" content=\"biochemistry\"\/>\n\t<link rel=\"canonical\" href=\"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=920\" \/>\n\t<meta name=\"generator\" content=\"All in One SEO (AIOSEO) 4.9.10\" \/>\n\t\t<meta property=\"og:locale\" content=\"en_US\" \/>\n\t\t<meta property=\"og:site_name\" content=\"Synthesis-Based BioFusion Technology Lab\" \/>\n\t\t<meta property=\"og:type\" content=\"article\" \/>\n\t\t<meta property=\"og:title\" content=\"De novo DNA synthesis using polymerase-nucleotide conjugates \u2014 Synthesis-Based BioFusion Technology Lab\" \/>\n\t\t<meta property=\"og:description\" content=\"(\uc6d0\ubb38) Published: 18 June 2018 Nature Biotechnology Abstract Oligonucleotides are almost exclusively synthesized using the nucleoside phosphoramidite method, even though it is limited to the direct synthesis of \u223c200 mers and produces hazardous waste. Here, we describe an oligonucleotide synthesis strategy that uses the template-independent polymerase terminal deoxynucleotidyl transferase (TdT).\" \/>\n\t\t<meta property=\"og:url\" content=\"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=920\" \/>\n\t\t<meta property=\"og:image\" content=\"https:\/\/biochemistry.khu.ac.kr\/lab\/wp-content\/uploads\/2018\/06\/cropped-logoKHU-1-2.png\" \/>\n\t\t<meta property=\"og:image:secure_url\" content=\"https:\/\/biochemistry.khu.ac.kr\/lab\/wp-content\/uploads\/2018\/06\/cropped-logoKHU-1-2.png\" \/>\n\t\t<meta property=\"og:image:width\" content=\"66\" \/>\n\t\t<meta property=\"og:image:height\" content=\"46\" \/>\n\t\t<meta property=\"article:tag\" content=\"let&#039;s do biology!\" \/>\n\t\t<meta property=\"article:tag\" content=\"let&#039;s do chemistry!\" \/>\n\t\t<meta property=\"article:tag\" content=\"let&#039;s do science!\" \/>\n\t\t<meta property=\"article:tag\" content=\"recent science news\" \/>\n\t\t<meta property=\"article:published_time\" content=\"2018-06-19T02:55:19+00:00\" \/>\n\t\t<meta property=\"article:modified_time\" content=\"2019-10-15T09:20:49+00:00\" \/>\n\t\t<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n\t\t<meta name=\"twitter:title\" content=\"De novo DNA synthesis using polymerase-nucleotide conjugates \u2014 Synthesis-Based BioFusion Technology Lab\" \/>\n\t\t<meta name=\"twitter:description\" content=\"(\uc6d0\ubb38) Published: 18 June 2018 Nature Biotechnology Abstract Oligonucleotides are almost exclusively synthesized using the nucleoside phosphoramidite method, even though it is limited to the direct synthesis of \u223c200 mers and produces hazardous waste. 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