{"id":2641,"date":"2019-02-08T15:09:00","date_gmt":"2019-02-08T06:09:00","guid":{"rendered":"http:\/\/163.180.4.222\/lab\/?p=2641"},"modified":"2019-02-08T15:09:00","modified_gmt":"2019-02-08T06:09:00","slug":"the-end-of-evolution","status":"publish","type":"post","link":"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=2641","title":{"rendered":"The end of evolution?"},"content":{"rendered":"<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>In 1996, biochemist Michael Behe introduced the notion of \u201cirreducible complexity,\u201d arguing that some biomolecular structures could not have evolved because their functionality requires interacting parts, the removal of any one of which renders the entire apparatus defective. This claim excited creationists and remains a central plank of the \u201cintelligent design\u201d movement, despite being rightly rejected by a U.S. federal judge in 2005 in\u00a0<em>Kitzmiller v. Dover Area School District.<\/em>\u00a0In\u00a0<em>Darwin Devolves<\/em>, Behe continues his quixotic efforts to overturn modern evolutionary theory.<\/p>\n<p>&nbsp;<\/p>\n<p id=\"p-5\">\n<figure id=\"F1\" class=\"fig pos-float type-figure nonresearch-content odd figure\">\n<div class=\"figure__head highwire-figure\">\n<div class=\"fig-inline\"><a class=\"fragment-images colorbox-load highwireFiguresMarkupProcessor-processed cboxElement\" style=\"box-sizing: inherit; background-color: transparent; color: gray; text-decoration: none; outline: 0px; font-weight: bold;\" title=\"\" href=\"http:\/\/science.sciencemag.org\/content\/sci\/363\/6427\/590\/F1.large.jpg?width=800&amp;height=600&amp;carousel=1\" rel=\"gallery-fragment-images-642607197\" data-figure-caption=\"&lt;div class=&quot;highwire-markup&quot;&gt;&lt;\/div&gt;\" data-icon-position=\"\" data-hide-link-title=\"0\"><span class=\"hw-responsive-img\"><img decoding=\"async\" class=\"fragment-image  lazyloaded\" src=\"http:\/\/science.sciencemag.org\/content\/sci\/363\/6427\/590\/F1.medium.gif\" data-src=\"http:\/\/science.sciencemag.org\/content\/sci\/363\/6427\/590\/F1.medium.gif\" \/><\/span><\/a><\/div>\n<div class=\"figure__options\">\n<ul class=\"highwire-figure-links\">\n<li class=\"0 first last\"><a class=\"highwire-figure-link highwire-figure-link-newtab link-icon\" href=\"http:\/\/science.sciencemag.org\/content\/sci\/363\/6427\/590\/F1.large.jpg\" target=\"_blank\" rel=\"noopener\"><i class=\"fa fa-external-link\"><\/i>\u00a0<span class=\"title\">Open in new tab<\/span><\/a>&nbsp;<\/li>\n<\/ul>\n<\/div>\n<\/div>\n<\/figure>\n<figure id=\"F2\" class=\"fig pos-float type-figure nonresearch-content odd figure\">\n<div class=\"figure__head highwire-figure\">\n<div class=\"fig-inline\"><a class=\"fragment-images colorbox-load highwireFiguresMarkupProcessor-processed cboxElement\" style=\"box-sizing: inherit; background-color: transparent; color: #37588a; text-decoration: none; font-weight: bold;\" title=\"Exaptation\u2014when evolution retools structures for new purposes, as happened with birds' feathers\u2014can be mistaken for irreducible complexity.\" href=\"http:\/\/science.sciencemag.org\/content\/sci\/363\/6427\/590\/F2.large.jpg?width=800&amp;height=600&amp;carousel=1\" rel=\"gallery-fragment-images-642607197\" data-figure-caption=\"&lt;div class=&quot;highwire-markup&quot;&gt;&lt;p id=&quot;p-4&quot; class=&quot;first-child&quot;&gt;Exaptation\u2014when evolution retools structures for new purposes, as happened with birds' feathers\u2014can be mistaken for irreducible complexity.&lt;\/p&gt;&lt;q class=&quot;attrib&quot; id=&quot;attrib-1&quot;&gt;PHOTO: MR. SUTTIPON YAKHAM\/SHUTTERSTOCK.COM&lt;\/q&gt;&lt;div class=&quot;sb-div caption-clear&quot;\/&gt;&lt;\/div&gt;\" data-icon-position=\"\" data-hide-link-title=\"0\"><span class=\"hw-responsive-img\"><img decoding=\"async\" class=\"fragment-image  lazyloaded\" src=\"http:\/\/science.sciencemag.org\/content\/sci\/363\/6427\/590\/F2.medium.gif\" aria-describedby=\"F2-caption\" data-src=\"http:\/\/science.sciencemag.org\/content\/sci\/363\/6427\/590\/F2.medium.gif\" \/><\/span><\/a><\/div>\n<div class=\"figure__options\">\n<ul class=\"highwire-figure-links\">\n<li class=\"0 first last\"><a class=\"highwire-figure-link highwire-figure-link-newtab link-icon\" href=\"http:\/\/science.sciencemag.org\/content\/sci\/363\/6427\/590\/F2.large.jpg\" target=\"_blank\" rel=\"noopener\"><i class=\"fa fa-external-link\"><\/i>\u00a0<span class=\"title\">Open in new tab<\/span><\/a><\/li>\n<\/ul>\n<\/div>\n<\/div><figcaption id=\"F2-caption\" class=\"fig-caption attrib\">\n<p id=\"p-4\" class=\"first-child\">Exaptation\u2014when evolution retools structures for new purposes, as happened with birds&#8217; feathers\u2014can be mistaken for irreducible complexity.<\/p>\n<p><q id=\"attrib-1\" class=\"attrib\">PHOTO: MR. SUTTIPON YAKHAM\/SHUTTERSTOCK.COM<\/q><\/p>\n<div class=\"sb-div caption-clear\"><\/div>\n<\/figcaption><\/figure>\n<p>&nbsp;<\/p>\n<p id=\"p-6\">In the grand scheme of evolution, mutations serve only to break structures and degrade functions, Behe argues. He allows that mutation and natural selection can explain species- and genus-level diversification, but only through the degradation of genes. Something else, he insists, is required for meaningful innovation. Here, Behe invokes a \u201cpurposeful design\u201d by an \u201cintelligent agent.\u201d<\/p>\n<p id=\"p-7\">There are indeed many examples of loss-of-function mutations that are advantageous, but Behe is selective in his examples. He dedicates the better part of chapter 7 to discussing a 65,000-generation\u00a0<em>Escherichia coli<\/em>\u00a0experiment, emphasizing the many mutations that arose that degraded function\u2014an expected mode of adaptation to a simple laboratory environment, by the way\u2014while dismissing improved functions and deriding one new one as a \u201csideshow\u201d (<a id=\"xref-ref-1-1\" class=\"xref-bibr\" href=\"http:\/\/science.sciencemag.org\/content\/363\/6427\/590?rss=1#ref-1\"><em>1<\/em><\/a>). (Full disclosure: The findings in question were published by coauthor Richard Lenski.)<\/p>\n<p id=\"p-8\">Behe also ignores the fact that some of his prior arguments have been dismantled (<a id=\"xref-ref-2-1\" class=\"xref-bibr\" href=\"http:\/\/science.sciencemag.org\/content\/363\/6427\/590?rss=1#ref-2\"><em>2<\/em><\/a>). He includes a lengthy appendix that argues that the blood-clotting cascade is irreducibly complex, for example, but fails to mention Kenneth Miller&#8217;s simple, elegant scheme for its stepwise evolution (<a id=\"xref-ref-3-1\" class=\"xref-bibr\" href=\"http:\/\/science.sciencemag.org\/content\/363\/6427\/590?rss=1#ref-3\"><em>3<\/em><\/a>) or the fact that a progenitor fibrinogen gene has been discovered in echinoderms (<a id=\"xref-ref-4-1\" class=\"xref-bibr\" href=\"http:\/\/science.sciencemag.org\/content\/363\/6427\/590?rss=1#ref-4\"><em>4<\/em><\/a>).<\/p>\n<p id=\"p-9\">Behe doubles down on his claim that the evolution of chloroquine resistance in malaria by random mutations is exceedingly unlikely because at least two mutations are required, neither of which is beneficial without the other. His calculations have already been refuted (<a id=\"xref-ref-5-1\" class=\"xref-bibr\" href=\"http:\/\/science.sciencemag.org\/content\/363\/6427\/590?rss=1#ref-5\"><em>5<\/em><\/a>), and it has long been known that neutral and even deleterious mutations can provide stepping stones to future adaptations. Indeed, a 2014 study, unmentioned by Behe, reported discovery of two genetic paths through which malaria has evolved chloroquine resistance through multiple steps (<a id=\"xref-ref-6-1\" class=\"xref-bibr\" href=\"http:\/\/science.sciencemag.org\/content\/363\/6427\/590?rss=1#ref-6\"><em>6<\/em><\/a>).<\/p>\n<p id=\"p-10\">Missing from Behe&#8217;s discussion is any mention of exaptation, the process by which nature retools structures for new function and possibly the most common mechanism that leads to the false impression of irreducible complexity. Some\u00a0<em>Sphingomonas<\/em>\u00a0bacteria, for example, have evolved the ability to digest a wood preservative, pentachlorophenol, by recruiting two unrelated biochemical pathways (<a id=\"xref-ref-7-1\" class=\"xref-bibr\" href=\"http:\/\/science.sciencemag.org\/content\/363\/6427\/590?rss=1#ref-7\"><em>7<\/em><\/a>). Neither pathway can do that job alone, yet there they are together. The feathers of birds, gas bladders of fish, and ossicles of mammals have similar exaptive origins.<\/p>\n<p id=\"p-11\">Exaptation also challenges Behe&#8217;s notion of \u201cdevolution\u201d by showing that loss of one function can lead to gain of another. The evolutionary ancestors of whales lost their ability to walk on land as their front limbs evolved into flippers, for example, but flippers proved advantageous in the long run.<\/p>\n<p id=\"p-12\">Behe is skeptical that gene duplication followed by random mutation and selection can contribute to evolutionary innovation. Yet there is overwhelming evidence that this underlies trichromatic vision in primates (<a id=\"xref-ref-8-1\" class=\"xref-bibr\" href=\"http:\/\/science.sciencemag.org\/content\/363\/6427\/590?rss=1#ref-8\"><em>8<\/em><\/a>), olfaction in mammals (<a id=\"xref-ref-9-1\" class=\"xref-bibr\" href=\"http:\/\/science.sciencemag.org\/content\/363\/6427\/590?rss=1#ref-9\"><em>9<\/em><\/a>), and developmental innovations in all metazoans through the diversification of HOX genes (<a id=\"xref-ref-10-1\" class=\"xref-bibr\" href=\"http:\/\/science.sciencemag.org\/content\/363\/6427\/590?rss=1#ref-10\"><em>10<\/em><\/a>). And in 2012, Andersson\u00a0<em>et al.<\/em>\u00a0showed that new functions can rapidly evolve in a suitable environment (<a id=\"xref-ref-11-1\" class=\"xref-bibr\" href=\"http:\/\/science.sciencemag.org\/content\/363\/6427\/590?rss=1#ref-11\"><em>11<\/em><\/a>). Behe acknowledges none of these studies, declaring an absence of evidence for the role of duplications in innovation.<\/p>\n<p id=\"p-13\">Behe asserts that new functions only arise through \u201cpurposeful design\u201d of new genetic information, a claim that cannot be tested. By contrast, modern evolutionary theory provides a coherent set of processes\u2014mutation, recombination, drift, and selection\u2014that can be observed in the laboratory and modeled mathematically and are consistent with the fossil record and comparative genomics.<\/p>\n<p id=\"p-14\">Ultimately,\u00a0<em>Darwin Devolves<\/em>\u00a0fails to challenge modern evolutionary science because, once again, Behe does not fully engage with it. He misrepresents theory and avoids evidence that challenges him.<\/p>\n<div id=\"license-1\" class=\"license\"><\/div>\n<p>&nbsp;<\/p>\n<p>(\uc6d0\ubb38: <a href=\"http:\/\/science.sciencemag.org\/content\/363\/6427\/590?rss=1\">\uc5ec\uae30<\/a>\ub97c \ud074\ub9ad\ud558\uc138\uc694~)<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>&nbsp; &nbsp; In 1996, biochemist Michael Behe introduced the notion of \u201cirreducible complexity,\u201d arguing that some biomolecular structures could not have evolved because their functionality<a href=\"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=2641\" class=\"more-link\">(more&#8230;)<\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2},"jetpack_post_was_ever_published":false},"categories":[32,33,29],"tags":[],"class_list":["post-2641","post","type-post","status-publish","format-standard","hentry","category-essays-on-science","category-do-biology","category-lets-do-science"],"aioseo_notices":[],"jetpack_publicize_connections":[],"jetpack_featured_media_url":"","jetpack-related-posts":[{"id":1432,"url":"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=1432","url_meta":{"origin":2641,"position":0},"title":"An ethical way forward for AI","author":"biochemistry","date":"August 24, 2018","format":false,"excerpt":"\u00a0 \u00a0 (\uc6d0\ubb38: \uc5ec\uae30\ub97c \ud074\ub9ad\ud558\uc138\uc694~) \u00a0 Science\u00a0\u00a024 Aug 2018: Vol. 361, Issue 6404, pp. 763-765 DOI: 10.1126\/science.361.6404.763-q \u00a0 \u00a0 \u00a0 Artificial intelligence (AI) is becoming prevalent in everyday life. Within the next 5 years, an estimated 55% of households worldwide are expected to own a voice assistant. Furthermore, medical diagnostics,\u2026","rel":"","context":"In &quot;Let's Do Computer Science!&quot;","block_context":{"text":"Let's Do Computer Science!","link":"https:\/\/biochemistry.khu.ac.kr\/lab\/?cat=35"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":1183,"url":"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=1183","url_meta":{"origin":2641,"position":1},"title":"Rethinking chemical risks","author":"biochemistry","date":"July 20, 2018","format":false,"excerpt":"\u00a0 \u00a0 (\uc6d0\ubb38: \uc5ec\uae30\ub97c \ud074\ub9ad\ud558\uc138\uc694~) \u00a0 \u00a0 Science\u00a0\u00a020 Jul 2018: Vol. 361, Issue 6399, pp. 240-242 DOI: 10.1126\/science.361.6399.240-r \u00a0 \u00a0 Modern life relies on vast numbers of different chemicals, from pharmaceuticals and cleaning products to pesticides and plastics. Wastewater treatment is widely used to avoid their release into the environment.\u2026","rel":"","context":"In &quot;Essays on Science&quot;","block_context":{"text":"Essays on Science","link":"https:\/\/biochemistry.khu.ac.kr\/lab\/?cat=32"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":1189,"url":"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=1189","url_meta":{"origin":2641,"position":2},"title":"All together now\u2026fly!","author":"biochemistry","date":"July 20, 2018","format":false,"excerpt":"\u00a0 \u00a0 (\uc6d0\ubb38: \uc5ec\uae30\ub97c \ud074\ub9ad\ud558\uc138\uc694~) \u00a0 Science\u00a0\u00a020 Jul 2018: Vol. 361, Issue 6399, pp. 240 DOI: 10.1126\/science.361.6399.240-a \u00a0 \u00a0 \u00a0Open in new tab Long-exposure photo of a flight with multiple drones CREDIT: ZSOLT B\u00c9ZSENYI \u00a0 \u00a0 Can the quick, responsive grace of a flock of birds or school of fish\u2026","rel":"","context":"In &quot;Let's Do Computer Science!&quot;","block_context":{"text":"Let's Do Computer Science!","link":"https:\/\/biochemistry.khu.ac.kr\/lab\/?cat=35"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":1436,"url":"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=1436","url_meta":{"origin":2641,"position":3},"title":"Robots help autistic kids interact with adults","author":"biochemistry","date":"August 24, 2018","format":false,"excerpt":"\u00a0 \u00a0 (\uc6d0\ubb38: \uc5ec\uae30\ub97c \ud074\ub9ad\ud558\uc138\uc694~) \u00a0 Science\u00a0\u00a024 Aug 2018: Vol. 361, Issue 6404, pp. 763-764 DOI: 10.1126\/science.361.6404.763-f \u00a0 \u00a0 Children with autism spectrum disorder (ASD) often struggle with social behaviors such as recognizing emotional responses in others and understanding gaze direction. 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