{"id":1185,"date":"2018-07-20T04:16:21","date_gmt":"2018-07-20T04:16:21","guid":{"rendered":"http:\/\/163.180.4.222\/lab\/?p=1185"},"modified":"2023-07-05T15:37:36","modified_gmt":"2023-07-05T06:37:36","slug":"a-new-portal-for-patient-data","status":"publish","type":"post","link":"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=1185","title":{"rendered":"A new portal for patient data"},"content":{"rendered":"<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>(\uc6d0\ubb38: <a href=\"http:\/\/science.sciencemag.org\/content\/361\/6399\/212?rss=1\">\uc5ec\uae30<\/a>\ub97c \ud074\ub9ad\ud558\uc138\uc694~)<\/p>\n<p>&nbsp;<\/p>\n<p><cite>Science\u00a0<\/cite>\u00a020 Jul 2018:<br \/>\nVol. 361, Issue 6399, pp. 212<br \/>\nDOI: 10.1126\/science.361.6399.212<\/p>\n<p>&nbsp;<\/p>\n<p id=\"p-4\">Under pressure to be more transparent about the results of drug testing studies, some companies have begun to share anonymized patient data from clinical trials with approved researchers on secure websites. An online platform launched this week aims to expand such efforts by offering a one-stop clearinghouse for those seeking to mine these data for new insights.<\/p>\n<p id=\"p-5\">The platform, created by Vivli, a nonprofit based in Cambridge, Massachusetts, debuts with access to more than 4000 clinical trial data sets from eight companies and nonprofits. It also features tools for combining and analyzing the data. \u201cThis is the first time it&#8217;s all going to be available in one place,\u201d Vivli Executive Director Rebecca Li says.<\/p>\n<p id=\"p-6\">Vivli, which spun out of a policy think tank at Harvard University\u2013affiliated Brigham and Women&#8217;s Hospital in Boston, is part of a push to encourage drug developers to share trial data\u2014even negative results, findings that show a treatment has no benefit. Companies seeking U.S. regulatory approval for a drug, as well as investigators funded by the National Institutes of Health, must post limited, summary results on\u00a0<a href=\"http:\/\/clinicaltrials.gov\/\">ClinicalTrials.gov<\/a>. But many researchers and policy analysts believe sharing detailed raw data on individual patients, stripped of identifying information, would be valuable. Researchers could confirm that a drug works, look for side effects, or explore new questions.<\/p>\n<p id=\"p-7\">Starting this month, the International Committee of Medical Journal Editors\u2014which includes the leaders of many major journals\u2014will ask submitting authors to include a data sharing plan that can include patient data. Such sharing remains controversial. In 2016, Jeffrey Drazen, editor of\u00a0<em>The New England Journal of Medicine<\/em>, worried in an editorial that it would embolden \u201cresearch parasites\u201d\u2014scientists who request others&#8217; data and quickly publish papers, preempting the scientists who generated the data. But Drazen ultimately endorsed the committee&#8217;s plan.<\/p>\n<p id=\"p-8\">Some companies have already responded. Drug giant Johnson &amp; Johnson allows researchers to request patient data at a 5-year-old site called YODA, sponsored by Yale University, whereas GlaxoSmithKline and 13 other firms share data at\u00a0<a href=\"http:\/\/clinicalstudydatarequest.com\/\">ClinicalStudyDataRequest.com<\/a>.<\/p>\n<p id=\"p-9\">Vivli aims to streamline researchers&#8217; ability to find, request, and combine data from these and other sites, Li says. It will both list data deposited elsewhere and eventually host data sets. GlaxoSmithKline, for example, is allowing Vivli to list more than 2000 of its data sets. Vivli will have an independent panel review some requests, but refer others to the sites that hold the data. Because of patient privacy concerns, users often won&#8217;t be able to download the data to their own computers, but will use the Vivli platform.<\/p>\n<p id=\"p-10\">Companies can purchase memberships to have Vivli share their data. Academic researchers will pay $2000 to $4500 per study for storage and sharing services. Data miners can freely use the site&#8217;s basic tools for a year, but after that will pay a daily fee of $12. Both the Bill &amp; Melinda Gates Foundation and Harvard plan to help researchers cover data submission costs.<\/p>\n<p id=\"p-11\">At the Gates Foundation in Seattle, Washington, officials anticipate that many grantees will deposit their clinical trial results in Vivli in order to meet the foundation&#8217;s data-sharing requirements. And Harvard officials will be encouraging faculty to add their clinical data sets, including hundreds from already completed studies.<\/p>\n<p id=\"p-12\">Some data sharing advocates are pleased by Vivli&#8217;s arrival. \u201cWe need to get everyone behind one platform instead of having a proliferation of these things,\u201d says epidemiologist Evan Mayo-Wilson of Johns Hopkins University in Baltimore, Maryland. There is uncertainty about demand, however. A 2016 study by researchers at Duke University in Durham, North Carolina, found that scientists had requested access to just 16% of more than 3200 patient data sets available on three platforms. One obstacle was the difficulty finding the data, says Duke cardiologist Eric Peterson, an author. Vivli could resolve that problem, he says, by serving as a clinical data \u201ccard catalog.\u201d<\/p>\n<div id=\"fn-group-1\" class=\"section fn-group\">\n<ul>\n<li id=\"fn-1\" class=\"fn\">\n<p id=\"p-1\"><a class=\"rev-xref\" href=\"http:\/\/science.sciencemag.org\/content\/361\/6399\/212.full#xref-fn-1-1\">\u21b5<\/a><span class=\"fn-label\">*<\/span>\u00a0<em>With reporting by Elizabeth Gamillo.<\/em><\/p>\n<\/li>\n<\/ul>\n<\/div>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>&nbsp; &nbsp; (\uc6d0\ubb38: \uc5ec\uae30\ub97c \ud074\ub9ad\ud558\uc138\uc694~) &nbsp; Science\u00a0\u00a020 Jul 2018: Vol. 361, Issue 6399, pp. 212 DOI: 10.1126\/science.361.6399.212 &nbsp; Under pressure to be more transparent about<a href=\"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=1185\" class=\"more-link\">(more&#8230;)<\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[33,35,29,30],"tags":[7,9,3,4],"class_list":["post-1185","post","type-post","status-publish","format-standard","hentry","category-do-biology","category-lets-do-computer-science","category-lets-do-science","category-recent-science-news","tag-do-biology","tag-lets-do-computer-science","tag-lets-do-science","tag-recent-science-news"],"aioseo_notices":[],"jetpack_publicize_connections":[],"jetpack_featured_media_url":"","jetpack-related-posts":[{"id":1591,"url":"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=1591","url_meta":{"origin":1185,"position":0},"title":"Synthesizing a therapeutic probiotic","author":"biochemistry","date":"September 9, 2018","format":false,"excerpt":"\u00a0 \u00a0 (\uc6d0\ubb38: \uc5ec\uae30\ub97c \ud074\ub9ad\ud558\uc138\uc694~) \u00a0 Science\u00a0\u00a007 Sep 2018: Vol. 361, Issue 6406, pp. 988 DOI: 10.1126\/science.361.6406.988-b \u00a0 Phenylketonuria is a disease caused by an inability to metabolize the amino acid phenylalanine, which can accumulate in the blood and brain, causing neurotoxicity. Patients are treated by restricting phenylalanine intake through\u2026","rel":"","context":"In &quot;Let's Do Biology!&quot;","block_context":{"text":"Let's Do Biology!","link":"https:\/\/biochemistry.khu.ac.kr\/lab\/?cat=33"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":1545,"url":"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=1545","url_meta":{"origin":1185,"position":1},"title":"New machine-learning technologies for computer-aided diagnosis","author":"biochemistry","date":"September 4, 2018","format":false,"excerpt":"\u00a0 \u00a0 (\uc6d0\ubb38) \u00a0 \u00a0 Nature Medicine\u00a0(2018) \u00a0 \u00a0 Machine learning can be used for computer-aided diagnosis of acute neurological events and retinal disease and can be incorporated into conventional clinical workflows to improve health outcomes. \u00a0 \u00a0 Machine learning is a branch of data science that trains computers to\u2026","rel":"","context":"In &quot;Let's Do Biology!&quot;","block_context":{"text":"Let's Do Biology!","link":"https:\/\/biochemistry.khu.ac.kr\/lab\/?cat=33"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":3724,"url":"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=3724","url_meta":{"origin":1185,"position":2},"title":"How to bring preprints to the charged field of medicine","author":"biochemistry","date":"June 8, 2019","format":false,"excerpt":"\u00a0 \u00a0 MedRxiv launches with beefed up screening processes to allay concerns about risks of publishing unvetted clinical research. \u00a0 \u00a0 The founders of the\u00a0popular biology preprint server bioRxiv\u00a0have launched a repository on which medical scientists can share their results before peer review. BioRxiv\u2019s success\u00a0prompted some clinical scientists to push\u2026","rel":"","context":"In &quot;Let's Do Biology!&quot;","block_context":{"text":"Let's Do Biology!","link":"https:\/\/biochemistry.khu.ac.kr\/lab\/?cat=33"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":2470,"url":"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=2470","url_meta":{"origin":1185,"position":3},"title":"Medicine in the digital age","author":"biochemistry","date":"January 8, 2019","format":false,"excerpt":"\u00a0 \u00a0 As\u00a0Nature Medicine\u00a0celebrates its 25th anniversary, we bring you a special Focus on Digital Medicine that highlights the new technologies transforming medicine and healthcare, as well as the related regulatory challenges ahead. \u00a0 \u00a0 Digital medicine, defined as the use of digital tools to upgrade the practice of medicine\u2026","rel":"","context":"In &quot;Essays on Science&quot;","block_context":{"text":"Essays on Science","link":"https:\/\/biochemistry.khu.ac.kr\/lab\/?cat=32"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":1372,"url":"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=1372","url_meta":{"origin":1185,"position":4},"title":"Live bacteria deliver crucial enzymes straight to the gut","author":"biochemistry","date":"August 14, 2018","format":false,"excerpt":"\u00a0 \u00a0 (\uc6d0\ubb38) \u00a0 \u00a0 A newborn baby is tested for the genetic disorder phenylketonuria, which may be treatable with bacteria engineered to compensate for an enzyme that patients lack. Credit: Andrew Harrer\/Bloomberg\/Getty \u00a0 Live bacteria deliver crucial enzymes straight to the gut Intestinal microbes can be programmed to make\u2026","rel":"","context":"In &quot;Let's Do Biology!&quot;","block_context":{"text":"Let's Do Biology!","link":"https:\/\/biochemistry.khu.ac.kr\/lab\/?cat=33"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":961,"url":"https:\/\/biochemistry.khu.ac.kr\/lab\/?p=961","url_meta":{"origin":1185,"position":5},"title":"Microsoft\u2019s purchase of GitHub leaves some scientists uneasy","author":"biochemistry","date":"June 25, 2018","format":false,"excerpt":"\u00a0 \u00a0 (\uc6d0\ubb38) \u00a0 \u00a0 They fear the online platform will become less open, but other researchers say the buyout could make GitHub more useful. \u00a0 \u00a0 \u00a0 Satya Nadella is chief executive of Microsoft, which announced last week that it is buying out code-sharing platform GitHub.Credit: Andrew Harrer\/Bloomberg\/Getty \u00a0\u2026","rel":"","context":"In &quot;Essays on Science&quot;","block_context":{"text":"Essays on Science","link":"https:\/\/biochemistry.khu.ac.kr\/lab\/?cat=32"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]}],"jetpack_sharing_enabled":false,"jetpack_shortlink":"https:\/\/wp.me\/p9Xo1j-j7","_links":{"self":[{"href":"https:\/\/biochemistry.khu.ac.kr\/lab\/index.php?rest_route=\/wp\/v2\/posts\/1185","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/biochemistry.khu.ac.kr\/lab\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/biochemistry.khu.ac.kr\/lab\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/biochemistry.khu.ac.kr\/lab\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/biochemistry.khu.ac.kr\/lab\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=1185"}],"version-history":[{"count":1,"href":"https:\/\/biochemistry.khu.ac.kr\/lab\/index.php?rest_route=\/wp\/v2\/posts\/1185\/revisions"}],"predecessor-version":[{"id":5639,"href":"https:\/\/biochemistry.khu.ac.kr\/lab\/index.php?rest_route=\/wp\/v2\/posts\/1185\/revisions\/5639"}],"wp:attachment":[{"href":"https:\/\/biochemistry.khu.ac.kr\/lab\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=1185"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/biochemistry.khu.ac.kr\/lab\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=1185"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/biochemistry.khu.ac.kr\/lab\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=1185"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}